4.2. Detection of mutations in the genes involved in drug resistsnse
Various PCR-based molecular genetic techniques for the detection of mutations of the genes associated with drug resistanse in M.tuberuclosis were reported. They the include direct sequencing28), single-strand conformation polymorphism analysis29), hetero-duplex formation assay30), reverse hybridization-based line probe assay31), and molecular beacon assay32) of PCR products. These techniques produce results within a much shorter time than the time required for conventional culture techniques.
References
1. Abe C, Hosojima S, Fukasawa Y, et al.: Comparison of MB-Check, BACTEC, and egg-based media for recovery of mycobacteria. J Clin Microbiol 1992; 30: 878-881.
2. Middlebrook G, Reggiardo Z, Tiger WD: Automatable radiometric detection of growth of Mycobacterium tuberculosis in selective media. Am Rev Respir Dis 1997; 115: 1066-1069.
3. Abe C, Hirano K, Wada M.: Evaluation of the Mycobacteria Growth Indicator Tube system using an oxygen sensitive fluorescent sensor for rapid detection of mycobacteria. In Clin Mycobacteriol (ed) by M. Casal, Prous Science, pp. 175-180, 1998.
4. Thorpe TC, Wilson ML, Turner JE, et al.: BacT/Alert: an automated colorimetric microbial detection system. J Clin Microbiol 1990; 28: 1608-1612.
5. Horn J: Redox systems as bacterial growth indicators. Biotest Bulletin 1995; 5: 181-186.
6. Ellner PD, Kiehn TE, Cammarata R, et al.: Rapid detection and identification of pathogenic mycobacteria by combining radiometric and nucleic acid probe methods. J Clin Microbiol 1988; 26: 1349-1352.
7. Arnold LJ, Hammond PW, Wiese WA, et, al.: Assay formats involving acridinium-ester-lebeled DNA probes. Clin Chem 1989; 35: 1588-1594.
8. Tisdall PA, DeYoung DR, Roberts GD, et al.: Identification of clinical isolates of mycobacteria with gas-liquid chromatography: a 10-month follow-up study. J Clin Microbiol 1982; 16: 400-402.
9. Thibert L and Lapierre S: Routine application of high-performance liquid chromatography for identification of mycobacteria. J Clin Microbiol 1993; 31: 1759-1763.
10. Mullis KB and Faloona FA: Specific synthesis of DNA in vitro via a polymerase-catalyzed reaction. Methods Enzymol 1987; 155: 335-350.
11. Jonas V, Alden MJ, Curry JI, et al.: Detection and identification of Mycobacterium tuberculosis directly from induced sputum specimens using amplification of rRNA. J Clin Microbiol 1993; 31: 2410-1416.
12. Walker GT, Fraiser MS, Schram JL, et al.: Strand displacement amplification-an isothermal in vitro DNA amplification technique. Nucleic Acids Res 1992; 20: 1691-1696.
13. Iovannisci DM and Winn-Deen ES: Ligation amplification and fluorescent detection of Mycobacterium tuberculosis DNA. Mol Cell Probes 1993; 7: 35-43.
14. Jacobs WR, Barletta RG, Udani R, et al.: Rapid assessment of drug susceptibilities