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4-1. Molecular mechanism of drug resistance in M. tuberculosis

Isoniazid resistance is well known to be associated with alterations in the catalase-peroxidase gene (katG)17, 18) or the inhA gene19), which encodes an enzyme involved in mycolic acid biosynthesis. Mutations20, 21) in the rpoB produce drug resistance by diminishing rifampin binding affinity for the RNA polymerase. Mutations22, 23) in genes encoding the ribosomal S12 protein (rpsL) and 16S rRNA (rrs) have always been detected in streptomycin-resistant M. tuberculosis. Miscense mutations24, 25) in the DNA gyrase (gyrA) gene have always been associated with increased resistance to fluoroquinolones. Amino acid substitutions26) in EmbB alter the drug-protein interaction and thereby cause ethambutol resistance. PZA resistant M. tuberculosis strains lose pyrazinamidase (PZase) activity. There is usually a good correlation between the loss of PZase activity and development of PZA resistance. Mutations26, 27) in the pncA gene encoding the PZase of M. tuberculosis could be involved in the loss of PZase activity.

 

Table 4. Frequency of Mutations in Drug-resistant M.tuberculosis Strains Isolated in mostly Asian Countries

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4.2. Detection of mutations in the genes involved in drug resistsnse

Various PCR-based molecular genetic techniques for the detection of mutations of the genes associated with drug resistanse in M.tuberuclosis were reported. They the include direct sequencing28), single-strand conformation polymorphism analysis29), hetero-duplex formation assay30), reverse hybridization-based line probe assay31), and molecular beacon assay32) of PCR products. These techniques produce results within a much shorter time than the time required for conventional culture techniques.

 

References

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2. Middlebrook G, Reggiardo Z, Tiger WD: Automatable radiometric detection of growth of Mycobacterium tuberculosis in selective media. Am Rev Respir Dis 1997; 115: 1066-1069.

3. Abe C, Hirano K, Wada M.: Evaluation of the Mycobacteria Growth Indicator Tube system using an oxygen sensitive fluorescent sensor for rapid detection of mycobacteria. In Clin Mycobacteriol (ed) by M. Casal, Prous Science, pp. 175-180, 1998.

4. Thorpe TC, Wilson ML, Turner JE, et al.: BacT/Alert: an automated colorimetric microbial detection system. J Clin Microbiol 1990; 28: 1608-1612.

5. Horn J: Redox systems as bacterial growth indicators. Biotest Bulletin 1995; 5: 181-186.

6. Ellner PD, Kiehn TE, Cammarata R, et al.: Rapid detection and identification of pathogenic mycobacteria by combining radiometric and nucleic acid probe methods. J Clin Microbiol 1988; 26: 1349-1352.

7. Arnold LJ, Hammond PW, Wiese WA, et, al.: Assay formats involving acridinium-ester-lebeled DNA probes. Clin Chem 1989; 35: 1588-1594.

8. Tisdall PA, DeYoung DR, Roberts GD, et al.: Identification of clinical isolates of mycobacteria with gas-liquid chromatography: a 10-month follow-up study. J Clin Microbiol 1982; 16: 400-402.

9. Thibert L and Lapierre S: Routine application of high-performance liquid chromatography for identification of mycobacteria. J Clin Microbiol 1993; 31: 1759-1763.

10. Mullis KB and Faloona FA: Specific synthesis of DNA in vitro via a polymerase-catalyzed reaction. Methods Enzymol 1987; 155: 335-350.

11. Jonas V, Alden MJ, Curry JI, et al.: Detection and identification of Mycobacterium tuberculosis directly from induced sputum specimens using amplification of rRNA. J Clin Microbiol 1993; 31: 2410-1416.

12. Walker GT, Fraiser MS, Schram JL, et al.: Strand displacement amplification-an isothermal in vitro DNA amplification technique. Nucleic Acids Res 1992; 20: 1691-1696.

13. Iovannisci DM and Winn-Deen ES: Ligation amplification and fluorescent detection of Mycobacterium tuberculosis DNA. Mol Cell Probes 1993; 7: 35-43.

14. Jacobs WR, Barletta RG, Udani R, et al.: Rapid assessment of drug susceptibilities

 

 

 

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